HPC

EGSnrc: Discussion 1 Minute

HPC

I am trying to submit a Batch job to a cluster

my primes.pbs job script :

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#!/bin/bash -l

#pbs -l walltime=00:10:00

#pbs -l nodes=1:ppn=5

#pbs -l mem=1gb

#pbs -l file=1gb

#pbs -M husein.alhamada@ulb.ac.be

cd /sulb1/tony/egsnrc/BEAM_EX16MVp/

exb BEAM_EX16MVp EX16MVp 700icru p=5 >& mywork.out

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please if you have one good example file to submit a scheduled batch job

share it with us

Thanks

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Published by rtownson

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8 thoughts on “HPC”

  2. Reading over your post again I think you might be trying to submit your submission script

    try running the following command from within bash (not inside a .pbs file)

    exb BEAM_EX16MVp EX16MVp 700icru p=5 batch=pbs

    exb will submit the appropriate information to torque (pbs) and you should see notes about jobs dispatching.

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  3. Thanks for help…….I did as you said and the message is …………((/cm/local/apps/torque/var/spool/mom_priv/jobs/1383552.SC: line 10: exb: command not found))……so do you think I have to change something in my .bash file ?

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  4. That line tells me that exb is inside a pbs submission script. That won’t work.

    Exb is an executable that creates your pbs script properly. It needs to be called from the command line, preferably with you inside the beam folder of the accelerator.

    Does this make sense? What error message do you get?

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  5. always I have this output ((/cm/local/apps/torque/var/spool/mom_priv/jobs/1387275.SC: line 10: exb: command not found))………if you can help me I can give you the user name and password to get it trying to execute the example ……have you used it before (BEAMnrc with cluster)?

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